Databases
Below are a number of genomic resources that we have been involved in creating.
C. Elegans Codon Adapter
Description: A method to control protein levels under native genetic regulation in Caenorhabditis elegans by using synthetic genes with adapted codons. .It allows preservation of 3′ and 5′ untranslated regions and thus endogenous genetic control. Plus, It can potentially be applied simultaneously to many genes at a time.
HeLa proteome
Description: Concentrations of ~8800 HeLa proteins as well as their copy number inside the cell. If you use the table, please cite our publication.
MitoCheck
Description: A digital mitotic cell allowing interactive exploration of dynamic changes in 3D sub-cellular localization patterns of multiple proteins simultaneously.
MitoSys
Description: Scientists from the MitoCheck consortium systematically inactivated all 22,000 human genes one by one in cultured human cells using RNA interference (RNAi). The cellular phenotypes upon the RNAi treatment were recorded by high-throughput live cell imaging. Automated analyses of the resulting images and movies revealed that some 600 out of the 22,000 human genes play a role in mitosis.
PhenoBank
Description: high-content Phenotypic screening data from three C. elegans screens characterizing essential genes. It retrieves phenotypic annotations and identifies genes with matched phenotypes across different biological contexts